Description : Unknown function
Gene families : OG_42_0001001 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.G01235.1 | |
Cluster | HCAA Clusters: Cluster_169 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_01029 | No alias | putative protein phosphatase 2c 55 | 0.03 | Orthogroups_2024-Update | |
Glyma.02G058600 | No alias | Protein phosphatase 2C family protein | 0.01 | Orthogroups_2024-Update | |
Mp8g04000.1 | No alias | Probable protein phosphatase 2C 71 OS=Oryza sativa... | 0.01 | Orthogroups_2024-Update | |
Sopen07g032460 | No alias | Stage II sporulation protein E (SpoIIE) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Predicted GO |
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001932 | PPM-type_phosphatase_dom | 192 | 405 |
No external refs found! |