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  5. Brara.G01237.1

Brara.G01237.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01237.1
Cluster HCAA Clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
At3g61890 No alias HB-12 [Source:UniProtKB/TrEMBL;Acc:A0A178VND2] 0.03 Orthogroups_2024-Update
Bradi3g56180 No alias homeobox 1 0.03 Orthogroups_2024-Update
Brara.A03941.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D00081.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I03165.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.05G030000 No alias homeobox 1 0.03 Orthogroups_2024-Update
Glyma.11G242200 No alias homeobox protein 6 0.03 Orthogroups_2024-Update
LOC_Os02g43330 No alias homeobox associated leucine zipper, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g37580 No alias homeobox associated leucine zipper, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g35910 No alias homeobox associated leucine zipper, putative, expressed 0.02 Orthogroups_2024-Update
MA_19453g0040 No alias (at3g01470 : 183.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_3951g0010 No alias (at1g69780 : 143.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00014389-RA No alias (at1g69780 : 146.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
PSME_00044412-RA No alias (at1g26960 : 130.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
PSME_00045697-RA No alias (at2g22430 : 145.0) Encodes a homeodomain leucine zipper... 0.05 Orthogroups_2024-Update
Potri.002G100600 No alias homeobox protein 16 0.03 Orthogroups_2024-Update
Potri.012G023700 No alias homeobox 7 0.04 Orthogroups_2024-Update
Pp1s154_145V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.03 Orthogroups_2024-Update
Pp1s65_52V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.01 Orthogroups_2024-Update
Pp1s77_184V6 No alias No description available 0.04 Orthogroups_2024-Update
Seita.2G368600.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g096320 No alias Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC) 0.06 Orthogroups_2024-Update
Solyc03g113270 No alias LEVAHOX1G L.esculentum homeobox 0.03 Orthogroups_2024-Update
Solyc05g006980 No alias Homeobox leucine zipper family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen01g040080 No alias Homeobox domain 0.03 Orthogroups_2024-Update
Sopen05g002940 No alias Homeobox domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 67 120
No external refs found!