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  5. Brara.G01705.1

Brara.G01705.1


Description : Unknown function


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01705.1
Cluster HCAA Clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
At3g44550 No alias Probable fatty acyl-CoA reductase 5... 0.03 Orthogroups_2024-Update
Brara.F01959.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Glyma.12G183300 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
PSME_00011678-RA No alias (at3g44540 : 266.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00015275-RA No alias (at3g44540 : 421.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00015276-RA No alias (at3g44540 : 403.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00019002-RA No alias (at3g44540 : 395.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00030498-RA No alias (at3g44540 : 380.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
Potri.004G185000 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
Potri.019G075200 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Potri.019G075300 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Seita.6G243900.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Sobic.004G060700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G170800.1 No alias fatty acyl CoA reductase *(FAR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033640 FAR_C 468 535
IPR013120 Male_sterile_NAD-bd 86 368
No external refs found!