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  5. Brara.G01751.1

Brara.G01751.1


Description : component *(NRPA1) of RNA polymerase I complex


Gene families : OG_42_0005280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G01751.1
Cluster HCAA Clusters: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g40950 No alias DNA-directed RNA polymerase I subunit RPA1, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA 16Dec
BP GO:0006351 transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR007083 RNA_pol_Rpb1_4 28 99
IPR007081 RNA_pol_Rpb1_5 106 761
No external refs found!