1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.G03215.1

Brara.G03215.1


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03215.1
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_09595 No alias protein strictosidine synthase-like 2 0.03 Orthogroups_2024-Update
A4A49_41543 No alias protein strictosidine synthase-like 10 0.03 Orthogroups_2024-Update
A4A49_57826 No alias protein strictosidine synthase-like 3 0.03 Orthogroups_2024-Update
At3g57010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 8... 0.03 Orthogroups_2024-Update
Bradi4g06230 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Brara.D00206.1 No alias regulatory protein *(LAP3) of exine formation & EC_4.3... 0.03 Orthogroups_2024-Update
PSME_00005282-RA No alias (at5g22020 : 271.0) Calcium-dependent phosphotriesterase... 0.03 Orthogroups_2024-Update
Seita.2G253100.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Seita.9G455800.1 No alias regulatory protein *(LAP3) of exine formation & EC_4.3... 0.02 Orthogroups_2024-Update
Sobic.002G186600.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.010G226300.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Solyc03g114540 No alias Strictosidine synthase-like protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc10g079610 No alias Strictosidine synthase, putative (AHRD V3.3 *** B9T2X5_RICCO) 0.03 Orthogroups_2024-Update
Sopen06g030310 No alias Strictosidine synthase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 144 232
No external refs found!