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  5. Brara.G03665.1

Brara.G03665.1


Description : regulatory protein *(FE) of florigen biosynthesis & GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G03665.1
Cluster HCAA Clusters: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
At5g16560 No alias Transcription repressor KAN1... 0.03 Orthogroups_2024-Update
Bradi5g20520 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G454449 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G051400 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.09G017400 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.12G184700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G017240.8 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G102040.15 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
LOC_Os06g40710 No alias Myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os06g45890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G082400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G137600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Sobic.002G161800.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G202300.2 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Solyc09g005370 No alias MYB transcription factor (AHRD V3.3 *-* K9JGB9_SOYBN) 0.02 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 74 122
IPR025756 Myb_CC_LHEQLE 167 206
No external refs found!