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  5. Brara.H00553.1

Brara.H00553.1


Description : component *(PsaL) of PS-I complex


Gene families : OG_42_0005223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00553.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_31898 No alias photosystem i reaction center subunit xi, chloroplastic 0.12 Orthogroups_2024-Update
A4A49_31899 No alias photosystem i reaction center subunit xi, chloroplastic 0.11 Orthogroups_2024-Update
At4g12800 No alias photosystem I subunit l [Source:TAIR;Acc:AT4G12800] 0.07 Orthogroups_2024-Update
Bradi4g08020 No alias photosystem I subunit l 0.07 Orthogroups_2024-Update
Cre12.g486300 No alias photosystem I subunit l 0.1 Orthogroups_2024-Update
Glyma.09G250800 No alias photosystem I subunit l 0.06 Orthogroups_2024-Update
Glyma.18G241700 No alias photosystem I subunit l 0.11 Orthogroups_2024-Update
HORVU3Hr1G009210.1 No alias component *(PsaL) of PS-I complex 0.03 Orthogroups_2024-Update
Kfl00881_0040 kfl00881_0040_v1.1 (q39654|psal_cucsa : 203.0) Photosystem I reaction... 0.11 Orthogroups_2024-Update
LOC_Os12g23200 No alias photosystem I reaction center subunit XI, chloroplast... 0.02 Orthogroups_2024-Update
MA_4125382g0010 No alias no hits & (original description: no original description) 0.1 Orthogroups_2024-Update
Mp7g18150.1 No alias component PsaL of PS-I complex 0.09 Orthogroups_2024-Update
PSME_00042744-RA No alias (q39654|psal_cucsa : 242.0) Photosystem I reaction... 0.08 Orthogroups_2024-Update
Pp1s15_408V6 No alias photosystem i reaction center subunit xi 0.14 Orthogroups_2024-Update
Pp1s41_267V6 No alias photosystem i reaction center subunit xi 0.16 Orthogroups_2024-Update
Pp1s54_165V6 No alias photosystem i reaction center subunit xi 0.19 Orthogroups_2024-Update
Seita.3G304000.1 No alias component *(PsaL) of PS-I complex 0.13 Orthogroups_2024-Update
Sobic.003G052500.1 No alias component *(PsaL) of PS-I complex 0.12 Orthogroups_2024-Update
Solyc06g082940 No alias Photosystem I reaction center subunit XI (AHRD V3.3 ***... 0.1 Orthogroups_2024-Update
Solyc06g082950 No alias Photosystem I reaction center subunit XI (AHRD V3.3 ***... 0.13 Orthogroups_2024-Update
Sopen06g034330 No alias Photosystem I reaction centre subunit XI 0.05 Orthogroups_2024-Update
Sopen06g034340 No alias Photosystem I reaction centre subunit XI 0.14 Orthogroups_2024-Update
evm.model.tig00000842.3 No alias (p23993|psal_horvu : 99.0) Photosystem I reaction center... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA 16Dec
CC GO:0009538 photosystem I reaction center IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003757 PSI_PsaL 61 213
No external refs found!