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  5. Brara.H02659.1

Brara.H02659.1


Description : class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0005942 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02659.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
96351 No alias photolyase 1 0.04 Orthogroups_2024-Update
Bradi3g22580 No alias photolyase 1 0.03 Orthogroups_2024-Update
Glyma.11G029500 No alias photolyase 1 0.03 Orthogroups_2024-Update
Pp1s72_320V6 No alias cpd photolyase 0.02 Orthogroups_2024-Update
Seita.9G281600.1 No alias class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 31 192
No external refs found!