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At2g28260


Description : Putative cyclic nucleotide-gated ion channel 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL29]


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g28260
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Bradi3g09550 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Bradi5g23700 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
Brara.A00709.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.B01472.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G135651 No alias cyclic nucleotide-gated channel 17 0.03 Orthogroups_2024-Update
Glyma.04G237400 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
LOC_Os06g08850 No alias cyclic nucleotide-gated ion channel 14, putative, expressed 0.04 Orthogroups_2024-Update
Potri.012G002200 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Potri.013G108200 No alias cyclic nucleotide-gated channel 18 0.04 Orthogroups_2024-Update
Sobic.009G188800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc03g098210 No alias Cyclic nucleotide gated channel CNGC15 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 79 398
IPR000595 cNMP-bd_dom 494 583
No external refs found!