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  5. Brara.H02899.1

Brara.H02899.1


Description : histone *(H4)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02899.1
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
150847 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
167497 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
233579 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
A4A49_57227 No alias histone h4 0.05 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.08 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.08 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.06 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.06 Orthogroups_2024-Update
At3g45930 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G332838 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.05 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.04 Orthogroups_2024-Update
HORVU1Hr1G020040.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU1Hr1G020060.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU4Hr1G063260.2 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_38882g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.01 Orthogroups_2024-Update
Seita.5G372700.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.05 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042586 peptide deformylase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 39 96
No external refs found!