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  5. Brara.H02996.1

Brara.H02996.1


Description : Unknown function


Gene families : OG_42_0000679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02996.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
At3g12360 No alias Ankyrin repeat-containing protein ITN1... 0.03 Orthogroups_2024-Update
Glyma.11G145227 No alias Ankyrin repeat family protein 0.04 Orthogroups_2024-Update
Glyma.13G331500 No alias Ankyrin repeat family protein 0.04 Orthogroups_2024-Update
Sobic.003G348400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc12g019060 No alias Ankyrin repeat family protein (AHRD V3.3 *** AT2G31820.1) 0.03 Orthogroups_2024-Update
Sopen06g001220 No alias Ankyrin repeats (3 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 422 535
IPR002110 Ankyrin_rpt 279 367
IPR002110 Ankyrin_rpt 125 195
IPR002110 Ankyrin_rpt 208 268
No external refs found!