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  5. Brara.I00859.1

Brara.I00859.1


Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0001556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I00859.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Brara.E01875.1 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
PSME_00010525-RA No alias (at1g47056 : 518.0) Encodes an F-box protein. Based on... 0.03 Orthogroups_2024-Update
Sobic.006G139700.1 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 49 79
IPR001611 Leu-rich_rpt 164 182
IPR001611 Leu-rich_rpt 136 159
No external refs found!