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  5. Brara.I01211.1

Brara.I01211.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I01211.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_22912 No alias f-box protein pp2-a13 0.04 Orthogroups_2024-Update
At1g63090 No alias F-box protein PP2-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN4] 0.03 Orthogroups_2024-Update
Brara.I03598.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os09g35680 No alias OsFBX339 - F-box domain containing protein, expressed 0.05 Orthogroups_2024-Update
Potri.001G109800 No alias phloem protein 2-A12 0.02 Orthogroups_2024-Update
Potri.003G121900 No alias phloem protein 2-A12 0.03 Orthogroups_2024-Update
Sobic.001G532000.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sopen12g029000 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 122 280
No external refs found!