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  5. Brara.I02459.1

Brara.I02459.1


Description : cryptochrome photoreceptor *(CRY)


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02459.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
92414 No alias cryptochrome 2 0.02 Orthogroups_2024-Update
At4g08920 No alias Cryptochrome-1 [Source:UniProtKB/Swiss-Prot;Acc:Q43125] 0.06 Orthogroups_2024-Update
GRMZM2G024739 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
GRMZM2G104262 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Glyma.06G103200 No alias cryptochrome 1 0.04 Orthogroups_2024-Update
Glyma.13G089200 No alias cryptochrome 1 0.04 Orthogroups_2024-Update
Glyma.14G174200 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Glyma.20G209900 No alias cryptochrome 2 0.03 Orthogroups_2024-Update
MA_10428291g0010 No alias (at4g08920 : 867.0) Encodes CRY1, a flavin-type... 0.02 Orthogroups_2024-Update
Mp2g17590.1 No alias cryptochrome photoreceptor (CRY) 0.03 Orthogroups_2024-Update
Seita.1G204600.1 No alias cryptochrome photoreceptor *(CRY) 0.04 Orthogroups_2024-Update
Seita.7G119400.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Sobic.004G188400.1 No alias cryptochrome photoreceptor *(CRY) 0.04 Orthogroups_2024-Update
Sobic.006G101600.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Solyc04g074180 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Sopen04g029360 No alias FAD binding domain of DNA photolyase 0.03 Orthogroups_2024-Update
Sopen12g029700 No alias FAD binding domain of DNA photolyase 0.05 Orthogroups_2024-Update
evm.model.contig_3749.1 No alias (at4g08920 : 292.0) Encodes CRY1, a flavin-type... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0019902 phosphatase binding IEP Predicted GO
MF GO:0019903 protein phosphatase binding IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 288 486
IPR006050 DNA_photolyase_N 12 167
IPR020978 Cryptochrome_C 517 629
No external refs found!