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  5. Brara.I02744.1

Brara.I02744.1


Description : component *(PsaF) of PS-I complex


Gene families : OG_42_0005007 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I02744.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
75361 No alias photosystem I subunit F 0.02 Orthogroups_2024-Update
A4A49_36554 No alias photosystem i reaction center subunit iii, chloroplastic 0.13 Orthogroups_2024-Update
At1g31330 No alias Photosystem I reaction center subunit III, chloroplastic... 0.14 Orthogroups_2024-Update
Bradi1g06890 No alias photosystem I subunit F 0.02 Orthogroups_2024-Update
Cre09.g412100 No alias photosystem I subunit F 0.11 Orthogroups_2024-Update
GRMZM2G085646 No alias photosystem I subunit F 0.04 Orthogroups_2024-Update
Glyma.05G022900 No alias photosystem I subunit F 0.14 Orthogroups_2024-Update
HORVU5Hr1G100140.2 No alias component *(PsaF) of PS-I complex 0.08 Orthogroups_2024-Update
Kfl00213_0040 kfl00213_0040_v1.1 (p13192|psaf_horvu : 208.0) Photosystem I reaction... 0.05 Orthogroups_2024-Update
MA_10090427g0010 No alias (at1g31330 : 242.0) Encodes subunit F of photosystem I.;... 0.07 Orthogroups_2024-Update
Mp2g02960.1 No alias component PsaF of PS-I complex 0.1 Orthogroups_2024-Update
PSME_00056206-RA No alias (at1g31330 : 247.0) Encodes subunit F of photosystem I.;... 0.05 Orthogroups_2024-Update
Pp1s121_54V6 No alias photosystem i subunit iii 0.12 Orthogroups_2024-Update
Pp1s19_276V6 No alias photosystem i subunit iii 0.12 Orthogroups_2024-Update
Pp1s345_25V6 No alias photosystem i subunit iii 0.18 Orthogroups_2024-Update
Pp1s80_23V6 No alias photosystem i subunit iii 0.04 Orthogroups_2024-Update
Seita.9G069300.1 No alias component *(PsaF) of PS-I complex 0.12 Orthogroups_2024-Update
Sobic.001G070500.1 No alias component *(PsaF) of PS-I complex 0.14 Orthogroups_2024-Update
Solyc02g069450 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.12 Orthogroups_2024-Update
Solyc02g069460 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.13 Orthogroups_2024-Update
Sopen02g018590 No alias Photosystem I reaction centre subunit III 0.08 Orthogroups_2024-Update
Sopen02g018600 No alias Photosystem I reaction centre subunit III 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA 16Dec
CC GO:0009538 photosystem I reaction center IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 54 219
No external refs found!