Brara.I02909.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I02909.1
Cluster	HCAA Clusters: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g52880	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Bradi3g56380	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Brara.J02876.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
LOC_Os01g17000	No alias	expressed protein	0.02	Orthogroups_2024-Update
MA_175298g0010	No alias	(at5g39660 : 214.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
MA_56828g0010	No alias	(at5g02460 : 145.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
PSME_00004776-RA	No alias	(at5g60850 : 127.0) Encodes a zinc finger protein.; OBF...	0.03	Orthogroups_2024-Update
PSME_00040668-RA	No alias	(at5g02460 : 137.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
Potri.001G238400	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Seita.1G303300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.004G254000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.04	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen08g004350	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000009	alpha-1,6-mannosyltransferase activity	IEP	Predicted GO
MF	GO:0000030	mannosyltransferase activity	IEP	Predicted GO
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000098	sulfur amino acid catabolic process	IEP	Predicted GO
CC	GO:0000139	Golgi membrane	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Predicted GO
MF	GO:0004143	diacylglycerol kinase activity	IEP	Predicted GO
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0006906	vesicle fusion	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009063	cellular amino acid catabolic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0016050	vesicle organization	IEP	Predicted GO
BP	GO:0016054	organic acid catabolic process	IEP	Predicted GO
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
BP	GO:0030328	prenylcysteine catabolic process	IEP	Predicted GO
BP	GO:0030329	prenylcysteine metabolic process	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
BP	GO:0044282	small molecule catabolic process	IEP	Predicted GO
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0048280	vesicle fusion with Golgi apparatus	IEP	Predicted GO
BP	GO:0048284	organelle fusion	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0061025	membrane fusion	IEP	Predicted GO
BP	GO:0090174	organelle membrane fusion	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	61	116

External Links

No external refs found!

Brara.I02909.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation