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  5. Brara.I03189.1

Brara.I03189.1


Description : Unknown function


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03189.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_30080 No alias zinc finger ccch domain-containing protein 62 0.02 Orthogroups_2024-Update
Glyma.06G185900 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G011990.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G140200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G123000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g032900 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update
Sopen04g033250 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update
Sopen08g020800 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 259 294
IPR001680 WD40_repeat 312 344
IPR001680 WD40_repeat 60 94
IPR001680 WD40_repeat 214 250
IPR001680 WD40_repeat 176 208
IPR001680 WD40_repeat 355 402
No external refs found!