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Description : Unknown function
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I04147.1 | |
| Cluster | HCAA Clusters: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_29196 | No alias | ring-h2 finger protein atl72 | 0.03 | Orthogroups_2024-Update | |
| At1g33480 | No alias | RING-H2 finger protein ATL58... | 0.04 | Orthogroups_2024-Update | |
| At2g17450 | No alias | Probable E3 ubiquitin-protein ligase ATL44... | 0.03 | Orthogroups_2024-Update | |
| At5g05280 | No alias | RING-H2 finger protein ATL73... | 0.03 | Orthogroups_2024-Update | |
| At5g10380 | No alias | E3 ubiquitin-protein ligase RING1... | 0.03 | Orthogroups_2024-Update | |
| Bradi4g13960 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi5g19490 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
| Brara.B02009.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Brara.E03386.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G146847 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G480106 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G203400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G025700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU1Hr1G074230.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G077490.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G082740.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g29710 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g45060 | No alias | RING-H2 finger protein ATL2M, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00051567-RA | No alias | (at3g16720 : 108.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G101800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.003G073300 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.016G067900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s71_162V6 | No alias | ring finger | 0.03 | Orthogroups_2024-Update | |
| Seita.3G374600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.4G088200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G109900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G305000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G358200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G158766.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g096650 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1) | 0.04 | Orthogroups_2024-Update | |
| Solyc12g087840 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g035310 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen02g031720 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen11g001290 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 59 | 102 |
| No external refs found! |