Brara.I04244.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04244.1
Cluster HCAA Clusters: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
At4g10150 No alias RING-H2 finger protein ATL7... 0.05 Orthogroups_2024-Update
At4g35480 No alias RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] 0.03 Orthogroups_2024-Update
At4g40070 No alias RING-H2 finger protein ATL32... 0.04 Orthogroups_2024-Update
At5g01880 No alias RING-H2 finger protein ATL74... 0.05 Orthogroups_2024-Update
At5g17600 No alias RING-H2 finger protein ATL52... 0.03 Orthogroups_2024-Update
Bradi2g49152 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g55990 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g11880 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02910.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.F00385.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G03117.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.I00473.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G301585 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G014500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G070640.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G079170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G009820.3 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Kfl00212_0070 kfl00212_0070_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_3380g0010 No alias (at1g49230 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.013G157000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G064700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G368500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G373200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G193000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.006G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.008G175700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g005110 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 181
No external refs found!