Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.I04244.1 | |
Cluster | HCAA Clusters: Cluster_342 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At4g10150 | No alias | RING-H2 finger protein ATL7... | 0.05 | Orthogroups_2024-Update | |
At4g35480 | No alias | RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] | 0.03 | Orthogroups_2024-Update | |
At4g40070 | No alias | RING-H2 finger protein ATL32... | 0.04 | Orthogroups_2024-Update | |
At5g01880 | No alias | RING-H2 finger protein ATL74... | 0.05 | Orthogroups_2024-Update | |
At5g17600 | No alias | RING-H2 finger protein ATL52... | 0.03 | Orthogroups_2024-Update | |
Bradi2g49152 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g55990 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi5g11880 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.A02910.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.B00007.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
Brara.B03540.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.F00385.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.F03530.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.G03117.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.I00473.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
GRMZM2G171277 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G301585 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
Glyma.10G289100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G014500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G060500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G070640.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G079170.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G096480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G009820.3 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Kfl00212_0070 | kfl00212_0070_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g33720 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_226198g0010 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
MA_3380g0010 | No alias | (at1g49230 : 140.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.013G157000 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G064700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G368500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G373200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.006G193000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.006G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Sobic.008G175700.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sopen06g015390 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen06g017190 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen08g025350 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen11g001290 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen11g005110 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004096 | catalase activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
BP | GO:0006914 | autophagy | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Predicted GO |
CC | GO:1902911 | protein kinase complex | IEP | Predicted GO |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 138 | 181 |
No external refs found! |