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  5. Brara.I04696.1

Brara.I04696.1


Description : GARP subgroup GLK transcription factor


Gene families : OG_42_0003250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04696.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
402806 No alias GOLDEN2-like 2 0.02 Orthogroups_2024-Update
Glyma.12G117700 No alias GBF\'s pro-rich region-interacting factor 1 0.04 Orthogroups_2024-Update
HORVU0Hr1G010940.1 No alias GARP subgroup GLK transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G083690.3 No alias GARP subgroup GLK transcription factor 0.02 Orthogroups_2024-Update
PSME_00033877-RA No alias (at2g20570 : 259.0) Encodes GLK1, Golden2-like 1, one of... 0.04 Orthogroups_2024-Update
Potri.T098900 No alias GBF\'s pro-rich region-interacting factor 1 0.03 Orthogroups_2024-Update
Sopen10g004030 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 151 200
No external refs found!