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  5. Brara.I04997.1

Brara.I04997.1


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000475 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04997.1
Cluster HCAA Clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AC149829.2_FG006 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g22000 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
Brara.F03398.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
MA_10429291g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.8G180800.1 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Sobic.004G236600.4 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sopen05g003180 No alias Kelch motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 174 220
IPR006652 Kelch_1 222 261
IPR006652 Kelch_1 133 172
No external refs found!