Brara.I05362.1

Description : A-class RAB GTPase

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I05362.1
Cluster	HCAA Clusters: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
Brara.A03162.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Glyma.01G080300	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update
Glyma.14G064800	No alias	RAB GTPase homolog A2B	0.04	Orthogroups_2024-Update
HORVU1Hr1G033390.3	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
HORVU3Hr1G061000.5	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
HORVU5Hr1G056470.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
LOC_Os01g54590	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g44070	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g35814	No alias	ras-related protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_129080g0010	No alias	(q39434\|rb2bv_betvu : 338.0) Ras-related protein Rab2BV...	0.03	Orthogroups_2024-Update
Potri.006G057700	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	16Dec
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!