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  5. Brara.J00413.1

Brara.J00413.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00413.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.04 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.09 Orthogroups_2024-Update
Bradi3g48180 No alias salt tolerance homologue 0.03 Orthogroups_2024-Update
GRMZM2G018876 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G127100 No alias B-box zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.08 Orthogroups_2024-Update
HORVU2Hr1G085000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.04 Orthogroups_2024-Update
Pp1s509_13V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Seita.7G149800.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G208400.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G131800.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Sopen06g029550 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 95
No external refs found!