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  5. At2g34440

At2g34440


Description : AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29]


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g34440
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
A4A49_27621 No alias agamous-like mads-box protein agl9 0.03 Orthogroups_2024-Update
A4A49_28929 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At3g30260 No alias AGAMOUS-like 79 [Source:UniProtKB/TrEMBL;Acc:Q7X9H6] 0.03 Orthogroups_2024-Update
At5g13790 No alias AGL15 [Source:UniProtKB/TrEMBL;Acc:A0A178UBU5] 0.03 Orthogroups_2024-Update
Brara.D01509.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03360.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.05 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.03 Orthogroups_2024-Update
Glyma.15G088600 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g03070 No alias transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g38770 No alias OsMADS61 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g34940 No alias OsMADS4 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
PSME_00017701-RA No alias (at4g16370 : 263.0) Encodes an oligopeptide transporter... 0.02 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.007G115000 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.009G084100 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Sopen01g037760 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update
Sopen12g029050 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 12 57
No external refs found!