1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J01729.1

Brara.J01729.1


Description : effector receptor *(NLR)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01729.1
Cluster HCAA Clusters: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
At1g72940 No alias At1g72940/F3N23_14 [Source:UniProtKB/TrEMBL;Acc:Q9SSN2] 0.04 Orthogroups_2024-Update
At3g04210 No alias At3g04210/T6K12_17 [Source:UniProtKB/TrEMBL;Acc:Q8H1N6] 0.05 Orthogroups_2024-Update
Brara.B02902.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.D00526.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.D01149.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.I02283.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.J01787.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.K01524.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Glyma.09G056400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.09G161400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Orthogroups_2024-Update
Glyma.10G184400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
PSME_00024214-RA No alias (at1g27170 : 402.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
Potri.017G105700 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.T129400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Pp1s14_170V6 No alias tir-nbs-lrr resistance protein 0.03 Orthogroups_2024-Update
Solyc11g011090 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g044060 No alias NB-ARC domain 0.04 Orthogroups_2024-Update
Sopen05g002560 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen12g032720 No alias Phloem protein 2 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 189 366
IPR011713 Leu-rich_rpt_3 655 674
IPR000157 TIR_dom 11 187
No external refs found!