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  5. Brara.J01739.1

Brara.J01739.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J01739.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
405704 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.04 Orthogroups_2024-Update
Bradi1g32370 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g16340 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g27620 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Brara.B01865.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Brara.B03508.1 No alias GARP subgroup PHL transcription factor & transcription... 0.06 Orthogroups_2024-Update
Brara.E02831.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Brara.F00986.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Brara.I02613.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G035700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G213700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G211600 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.13G228900 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.16G152200 No alias Homeodomain-like superfamily protein 0.07 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G045770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G054350.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G031470.1 No alias regulatory protein *(FE) of florigen biosynthesis & GARP... 0.02 Orthogroups_2024-Update
HORVU7Hr1G107500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g07770 No alias Myb transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_84935g0010 No alias (at1g14600 : 113.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00007590-RA No alias (at2g38300 : 112.0) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G096300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G100100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G075100 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.011G023600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G117000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.019G020900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s37_226V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.4G175600.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sobic.009G178000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G220000.1 No alias GARP subgroup PHL transcription factor & regulatory... 0.02 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Solyc09g005030 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.03 Orthogroups_2024-Update
Solyc11g022470 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen10g035030 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 146 192
IPR001005 SANT/Myb 47 98
No external refs found!