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  5. Brara.J02098.1

Brara.J02098.1


Description : subgroup ERF-X transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J02098.1
Cluster HCAA Clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
A4A49_21212 No alias ethylene-responsive transcription factor erf008 0.02 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g11890 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G039870 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.02G236800 No alias cytokinin response factor 4 0.06 Orthogroups_2024-Update
Glyma.04G217400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g58420 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g46400 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g41060 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00046682-RA No alias (at3g16770 : 96.3) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G021000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G036100 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Pp1s293_53V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G071700.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sopen10g028020 No alias AP2 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 45 94
No external refs found!