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  5. Brara.K00319.1

Brara.K00319.1


Description : MYB class-R2R3 subgroup-4 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00319.1
Cluster HCAA Clusters: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_11057 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
AC217264.3_FG005 No alias myb domain protein 101 0.02 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.03 Orthogroups_2024-Update
At2g32460 No alias Transcription factor MYB101... 0.02 Orthogroups_2024-Update
Bradi5g15246 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Bradi5g20051 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03738.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03242.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G001223 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
GRMZM2G131442 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
GRMZM2G160840 No alias myb domain protein 78 0.02 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.04 Orthogroups_2024-Update
GRMZM2G425427 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.08G317800 No alias myb domain protein 97 0.04 Orthogroups_2024-Update
Glyma.12G105400 No alias myb domain protein 9 0.04 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.14G214500 No alias myb domain protein 43 0.05 Orthogroups_2024-Update
HORVU2Hr1G089310.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G056980.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G067380.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g11780 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g26170 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00034307-RA No alias (at3g61250 : 188.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.001G408700 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Potri.014G100800 No alias myb domain protein 7 0.03 Orthogroups_2024-Update
Pp1s189_29V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.03 Orthogroups_2024-Update
Pp1s389_40V6 No alias Myb-related protein Myb4 (OsMyb4) (Transcription factor... 0.02 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G425100.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G385450.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G303400.1 No alias accessory protein (LMI2) of floral meristem identity control 0.04 Orthogroups_2024-Update
Solyc06g074910 No alias potato leaf 0.03 Orthogroups_2024-Update
Solyc06g083900 No alias R2R3MYB transcription factor 13 0.03 Orthogroups_2024-Update
Solyc10g005550 No alias R2R3MYB transcription factor 63 0.02 Orthogroups_2024-Update
Solyc10g044680 No alias R2R3MYB transcription factor 55 0.05 Orthogroups_2024-Update
Solyc11g065840 No alias R2R3MYB transcription factor 46 0.03 Orthogroups_2024-Update
Solyc12g096200 No alias R2R3MYB transcription factor 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP Predicted GO
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004376 glycolipid mannosyltransferase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!