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  5. Brara.K00551.1

Brara.K00551.1


Description : Unknown function


Gene families : OG_42_0000608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00551.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
At3g58860 No alias Putative F-box protein At3g58860... 0.03 Orthogroups_2024-Update
At3g62430 No alias F-box protein At3g62430 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP7] 0.03 Orthogroups_2024-Update
At3g62440 No alias SAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA18] 0.04 Orthogroups_2024-Update
Brara.I04504.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 10 44
No external refs found!