- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : UDP-sulfoquinovose synthase *(SQD1)
Gene families : OG_42_0006322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006322_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.K00674.1 | |
| Cluster | HCAA Clusters: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g34340 | No alias | sulfoquinovosyldiacylglycerol 1 | 0.04 | Orthogroups_2024-Update | |
| Cre16.g656400 | No alias | sulfoquinovosyldiacylglycerol 1 | 0.01 | Orthogroups_2024-Update | |
| Kfl00015_0100 | kfl00015_0100_v1.1 | (at4g33030 : 643.0) involved in sulfolipid biosynthesis;... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0006605 | protein targeting | IEP | Predicted GO |
| BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008312 | 7S RNA binding | IEP | Predicted GO |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
| CC | GO:0048500 | signal recognition particle | IEP | Predicted GO |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001509 | Epimerase_deHydtase | 89 | 377 |
| No external refs found! |