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  5. At2g37470

At2g37470


Description : Histone H2B.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS0]


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g37470
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
182308 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_60323 No alias putative histone h2b.1 0.04 Orthogroups_2024-Update
Brara.B01057.1 No alias histone *(H2B) 0.08 Orthogroups_2024-Update
Brara.F01827.1 No alias histone *(H2B) 0.07 Orthogroups_2024-Update
Brara.J01359.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
Brara.J01445.1 No alias histone *(H2B) 0.06 Orthogroups_2024-Update
Cre06.g264800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g264900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g266750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g268250 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g273850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274750 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276550 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g276900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504550 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g505600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g711750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G141432 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G305027 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G306258 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G401147 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G472696 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G198500 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G141600 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.11G141800 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G142100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G065100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G065200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G065400 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.19G173400 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G191600 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G056530.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU1Hr1G078480.6 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G013530.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G086610.4 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU4Hr1G009040.2 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU7Hr1G110310.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Kfl01110_0020 kfl01110_0020_v1.... (p16868|h2b4_volca : 167.0) Histone H2B.4 (H2B-IV) -... 0.03 Orthogroups_2024-Update
LOC_Os01g05630 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os01g06010 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
Potri.008G029900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Seita.2G294900.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sobic.003G067500.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sobic.003G200501.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Solyc02g038690 No alias Histone H2B (AHRD V3.3 *** K4B5W3_SOLLC) 0.04 Orthogroups_2024-Update
Solyc03g071620 No alias Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) 0.04 Orthogroups_2024-Update
Solyc05g055440 No alias Histone H2B (AHRD V3.3 *** K4C2M0_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g005390 No alias Histone H2B (AHRD V3.3 *** K4C323_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g074780 No alias Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g074790 No alias Histone H2B (AHRD V3.3 *** M1AAN4_SOLTU) 0.04 Orthogroups_2024-Update
Solyc06g075800 No alias Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC) 0.04 Orthogroups_2024-Update
Solyc11g007920 No alias Histone H2B (AHRD V3.3 *** K4D553_SOLLC) 0.04 Orthogroups_2024-Update
Solyc11g007930 No alias Histone H2B (AHRD V3.3 *** K4D554_SOLLC) 0.04 Orthogroups_2024-Update
Solyc11g066430 No alias histone H2B 0.04 Orthogroups_2024-Update
Sopen03g019890 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen05g033890 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen06g031230 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen06g032230 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen11g003790 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen11g003800 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g026180 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen12g006850 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 115
No external refs found!