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  5. Brara.K01117.1

Brara.K01117.1


Description : Unknown function


Gene families : OG_42_0008622 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008622_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01117.1
Cluster HCAA Clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_2621.2 No alias (at4g18460 : 102.0) D-Tyr-tRNA(Tyr) deacylase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEA 16Dec
CC GO:0005737 cytoplasm IEA 16Dec
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003732 Daa-tRNA_deacyls_DTD 49 194
No external refs found!