Description : arabinogalactan protein *(Xylogen)
Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.K01519.1 | |
Cluster | HCAA Clusters: Cluster_343 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At4g14815 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | Orthogroups_2024-Update | |
MA_5581g0010 | No alias | (at3g22600 : 87.0) Bifunctional inhibitor/lipid-transfer... | 0.02 | Orthogroups_2024-Update | |
PSME_00032772-RA | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
Seita.9G508700.1 | No alias | arabinogalactan protein *(Xylogen) | 0.03 | Orthogroups_2024-Update | |
Sobic.001G059500.1 | No alias | arabinogalactan protein *(Xylogen) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Predicted GO |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predicted GO |
CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Predicted GO |
MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Predicted GO |
MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016140 | Bifunc_inhib/LTP/seed_store | 20 | 107 |
No external refs found! |