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  5. HORVU0Hr1G019620.27

HORVU0Hr1G019620.27


Description : RNA editing factor *(DYW7)


Gene families : OG_42_0009417 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G019620.27
Cluster HCAA Clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Bradi3g35210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 551 572
IPR002885 Pentatricopeptide_repeat 238 266
IPR002885 Pentatricopeptide_repeat 579 609
IPR002885 Pentatricopeptide_repeat 479 505
IPR002885 Pentatricopeptide_repeat 443 472
IPR002885 Pentatricopeptide_repeat 134 163
IPR002885 Pentatricopeptide_repeat 615 641
IPR002885 Pentatricopeptide_repeat 652 675
IPR002885 Pentatricopeptide_repeat 408 438
IPR002885 Pentatricopeptide_repeat 380 406
IPR002885 Pentatricopeptide_repeat 209 235
IPR032867 DYW_dom 800 878
IPR002885 Pentatricopeptide_repeat 269 317
No external refs found!