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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU0Hr1G023470.1 | |
| Cluster | HCAA Clusters: Cluster_149 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 96927 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| At2g01510 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.03 | Orthogroups_2024-Update | |
| At3g25060 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g00381 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi1g27320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g29450 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | Orthogroups_2024-Update | |
| Brara.A02032.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.H01750.1 | No alias | RNA editing factor *(SLO4) | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G096602 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G084530.3 | No alias | RNA editing factor *(SLO4) | 0.04 | Orthogroups_2024-Update | |
| HORVU2Hr1G107430.1 | No alias | RNA editing factor *(MEF10) | 0.06 | Orthogroups_2024-Update | |
| HORVU4Hr1G014730.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G021240.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G066010.3 | No alias | RNA editing factor *(OTP87) | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G079090.7 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G063760.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os03g13830 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_124907g0010 | No alias | (at2g13600 : 490.0) Pentatricopeptide repeat (PPR)... | 0.07 | Orthogroups_2024-Update | |
| PSME_00001413-RA | No alias | (at4g18750 : 525.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00053797-RA | No alias | (at4g02750 : 615.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056965-RA | No alias | (at4g39530 : 592.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| Pp1s68_207V6 | No alias | ppr gene for putative pentatricopeptide repeat-like protein PPR | 0.03 | Orthogroups_2024-Update | |
| Seita.3G006500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.04 | Orthogroups_2024-Update | |
| Seita.7G277600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.9G213100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sopen03g011150 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen10g003810 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen12g021390 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009733 | response to auxin | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 423 | 449 |
| IPR002885 | Pentatricopeptide_repeat | 320 | 345 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 241 |
| IPR002885 | Pentatricopeptide_repeat | 459 | 487 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 420 |
| IPR002885 | Pentatricopeptide_repeat | 292 | 317 |
| IPR002885 | Pentatricopeptide_repeat | 497 | 520 |
| IPR002885 | Pentatricopeptide_repeat | 144 | 191 |
| No external refs found! |