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  5. HORVU1Hr1G013810.1

HORVU1Hr1G013810.1


Description : Unknown function


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G013810.1
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g38400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G058000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G058100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G204600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G204800.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.002G054200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G024600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G027600.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 167
IPR002885 Pentatricopeptide_repeat 209 239
IPR002885 Pentatricopeptide_repeat 385 415
IPR002885 Pentatricopeptide_repeat 628 677
IPR002885 Pentatricopeptide_repeat 312 361
IPR002885 Pentatricopeptide_repeat 558 607
IPR002885 Pentatricopeptide_repeat 242 291
IPR002885 Pentatricopeptide_repeat 699 746
IPR002885 Pentatricopeptide_repeat 421 466
IPR002885 Pentatricopeptide_repeat 487 537
No external refs found!