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  5. HORVU1Hr1G048700.4

HORVU1Hr1G048700.4


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G048700.4
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_06537 No alias f-box protein pp2-a15 0.02 Orthogroups_2024-Update
A4A49_09596 No alias f-box protein pp2-a13 0.03 Orthogroups_2024-Update
A4A49_35789 No alias f-box protein pp2-a13 0.03 Orthogroups_2024-Update
At3g53000 No alias F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92] 0.03 Orthogroups_2024-Update
Bradi3g31520 No alias phloem protein 2-A13 0.04 Orthogroups_2024-Update
Glyma.09G145700 No alias phloem protein 2-A13 0.02 Orthogroups_2024-Update
HORVU1Hr1G017720.7 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g02550 No alias OsFBX76 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g48270 No alias OsFBX148 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.006G117600 No alias phloem protein 2-A15 0.03 Orthogroups_2024-Update
Seita.2G281600.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Solyc08g080360 No alias F-box protein PP2-B1 0.03 Orthogroups_2024-Update
Solyc10g085490 No alias F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR) 0.03 Orthogroups_2024-Update
Sopen01g037470 No alias Phloem protein 2 0.03 Orthogroups_2024-Update
Sopen10g034920 No alias Phloem protein 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 126 284
No external refs found!