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  5. HORVU1Hr1G064870.3

HORVU1Hr1G064870.3


Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G064870.3
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
119313 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
134276 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
At1g20010 No alias Tubulin beta-5 chain [Source:UniProtKB/Swiss-Prot;Acc:P29513] 0.02 Orthogroups_2024-Update
Brara.A01134.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Brara.B02782.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.H01049.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.J02165.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Glyma.05G126100 No alias tubulin beta-7 chain 0.02 Orthogroups_2024-Update
Glyma.10G235100 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Glyma.14G219300 No alias tubulin beta-1 chain 0.02 Orthogroups_2024-Update
PSME_00001846-RA No alias (q40665|tbb3_orysa : 816.0) Tubulin beta-3 chain (Beta-3... 0.03 Orthogroups_2024-Update
Potri.006G035400 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.011G162500 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_136V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Seita.4G265500.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.08 Orthogroups_2024-Update
Sobic.010G224900.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.05 Orthogroups_2024-Update
Sopen04g022350 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update
Sopen06g011750 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update
Sopen10g031450 No alias Tubulin/FtsZ family, GTPase domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 83 291
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 341 462
No external refs found!