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  5. HORVU1Hr1G068430.3

HORVU1Hr1G068430.3


Description : regulatory subunit beta of SnRK1 kinase complex & regulatory subunit beta of SNF1-related SnRK1 kinase complex


Gene families : OG_42_0001630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G068430.3
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Brara.B00935.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.02 Orthogroups_2024-Update
Brara.J01513.1 No alias regulatory subunit beta of SnRK1 kinase complex &... 0.03 Orthogroups_2024-Update
GRMZM2G025459 No alias 5\'-AMP-activated protein kinase beta-2 subunit protein 0.03 Orthogroups_2024-Update
Solyc12g099970 No alias SNF1 kinase complex anchoring protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
MF GO:0097602 cullin family protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 90 170
IPR006828 ASC_dom 204 273
No external refs found!