1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G086120.3

HORVU1Hr1G086120.3


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G086120.3
Cluster HCAA Clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
At3g04110 No alias Glutamate receptor 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8W7] 0.05 Orthogroups_2024-Update
Brara.D01745.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
GRMZM2G139933 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Glyma.13G165100 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
Glyma.16G061701 No alias glutamate receptor 2 0.02 Orthogroups_2024-Update
LOC_Os06g08900 No alias glutamate receptor 2.6 precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g01310 No alias glutamate receptor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G102600 No alias glutamate receptor 3.6 0.03 Orthogroups_2024-Update
Pp1s56_31V6 No alias glutamate-gated kainate-type ion channel receptor subunit 5 0.02 Orthogroups_2024-Update
Solyc06g063200 No alias glutamate receptor-like 2.4 0.02 Orthogroups_2024-Update
evm.model.contig_3514.1 No alias (at4g35290 : 111.0) Encodes a putative glutamate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
MF GO:0097602 cullin family protein binding IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 50 407
IPR001320 Iontro_rcpt 812 840
IPR001638 Solute-binding_3/MltF_N 490 811
No external refs found!