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  5. At2g44380

At2g44380


Description : At2g44380 [Source:UniProtKB/TrEMBL;Acc:O64872]


Gene families : OG_42_0001343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g44380
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At2g27660 No alias Cysteine/Histidine-rich C1 domain family protein... 0.04 Orthogroups_2024-Update
Potri.012G038400 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Orthogroups_2024-Update
Solyc01g073830 No alias LOW QUALITY:Cysteine/Histidine-rich C1 domain family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 71 118
IPR004146 DC1 129 181
IPR004146 DC1 16 61
No external refs found!