1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU2Hr1G043130.15

HORVU2Hr1G043130.15


Description : Qa-type SYP1-group component of SNARE membrane fusion complex


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU2Hr1G043130.15
Cluster HCAA Clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
151097 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
443146 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
74098 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
Bradi1g25036 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
Bradi3g07970 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
Glyma.02G195400 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
Glyma.13G307600 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
Glyma.16G151200 No alias syntaxin of plants 111 0.03 Orthogroups_2024-Update
HORVU3Hr1G115630.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.05 Orthogroups_2024-Update
HORVU4Hr1G011180.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.03 Orthogroups_2024-Update
MA_28961g0010 No alias (at1g11250 : 290.0) member of SYP12 Gene Family;... 0.04 Orthogroups_2024-Update
Seita.3G347200.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.03 Orthogroups_2024-Update
Sopen01g025910 No alias Syntaxin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 35 243
No external refs found!