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  5. At2g47610

At2g47610


Description : 60S ribosomal protein L7a-1 [Source:UniProtKB/Swiss-Prot;Acc:P49692]


Gene families : OG_42_0001648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g47610
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
270545 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 Orthogroups_2024-Update
A4A49_61918 No alias 60s ribosomal protein l7a-2 0.03 Orthogroups_2024-Update
Bradi4g34750 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Orthogroups_2024-Update
Bradi5g24680 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.08 Orthogroups_2024-Update
Brara.A01492.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.D00049.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.G01985.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.I04344.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.K01473.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre12.g529651 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Orthogroups_2024-Update
GRMZM2G178968 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Orthogroups_2024-Update
GRMZM5G870752 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Orthogroups_2024-Update
Glyma.02G002800 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Orthogroups_2024-Update
Glyma.10G006200 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Orthogroups_2024-Update
Glyma.11G103700 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Orthogroups_2024-Update
Glyma.12G028500 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G076700.2 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00122_0060 kfl00122_0060_v1.1 (p35685|rl7a_orysa : 414.0) 60S ribosomal protein L7a -... 0.02 Orthogroups_2024-Update
MA_109678g0010 No alias (p35685|rl7a_orysa : 335.0) 60S ribosomal protein L7a -... 0.05 Orthogroups_2024-Update
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.02 Orthogroups_2024-Update
PSME_00011086-RA No alias (p35685|rl7a_orysa : 336.0) 60S ribosomal protein L7a -... 0.03 Orthogroups_2024-Update
Potri.004G113800 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 Orthogroups_2024-Update
Pp1s149_30V6 No alias 60s ribosomal protein l7a 0.05 Orthogroups_2024-Update
Pp1s149_35V6 No alias 60s ribosomal protein l7a 0.04 Orthogroups_2024-Update
Pp1s211_31V6 No alias 60s ribosomal protein l7a 0.1 Orthogroups_2024-Update
Pp1s37_336V6 No alias 60s ribosomal protein l7a 0.02 Orthogroups_2024-Update
Pp1s90_23V6 No alias 60s ribosomal protein l7a 0.02 Orthogroups_2024-Update
Seita.2G267400.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Seita.4G177300.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.6G224900.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G258800.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.002G259000.1 No alias component *(eL8) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc01g097760 No alias 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc06g050120 No alias 60S ribosomal protein L7A-like (AHRD V3.3 *** Q2VCI3_SOLTU) 0.05 Orthogroups_2024-Update
Solyc06g064470 No alias 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Sopen01g041360 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.08 Orthogroups_2024-Update
Sopen06g015510 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.04 Orthogroups_2024-Update
Sopen06g022940 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 0.04 Orthogroups_2024-Update
evm.model.contig_3485.8 No alias (p35685|rl7a_orysa : 308.0) 60S ribosomal protein L7a -... 0.09 Orthogroups_2024-Update
evm.model.tig00000128.22 No alias (p35685|rl7a_orysa : 240.0) 60S ribosomal protein L7a -... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 114 203
No external refs found!