- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(PCC1) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex
Gene families : OG_42_0007135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007135_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU2Hr1G103800.3 | |
| Cluster | HCAA Clusters: Cluster_268 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Potri.015G011500 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000178 | exosome (RNase complex) | IEP | Predicted GO |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Predicted GO |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Predicted GO |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0048878 | chemical homeostasis | IEP | Predicted GO |
| BP | GO:0050801 | ion homeostasis | IEP | Predicted GO |
| BP | GO:0055065 | metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Predicted GO |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0055080 | cation homeostasis | IEP | Predicted GO |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015419 | CTAG/Pcc1 | 60 | 130 |
| No external refs found! |