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  5. At3g02550

At3g02550


Description : LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g02550
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Brara.A03882.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00021971-RA No alias (at1g67100 : 181.0) LOB domain-containing protein 40... 0.03 Orthogroups_2024-Update
PSME_00021974-RA No alias (at1g67100 : 182.0) LOB domain-containing protein 40... 0.06 Orthogroups_2024-Update
PSME_00026677-RA No alias (at1g67100 : 203.0) LOB domain-containing protein 40... 0.02 Orthogroups_2024-Update
PSME_00031117-RA No alias (at1g67100 : 181.0) LOB domain-containing protein 40... 0.04 Orthogroups_2024-Update
PSME_00041119-RA No alias (at5g67420 : 212.0) LOB domain-containing protein 37... 0.05 Orthogroups_2024-Update
Potri.008G120600 No alias LOB domain-containing protein 42 0.05 Orthogroups_2024-Update
Potri.012G056800 No alias LOB domain-containing protein 41 0.03 Orthogroups_2024-Update
Pp1s41_47V6 No alias lob domain-containing 0.03 Orthogroups_2024-Update
Seita.3G120000.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g009320 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 4 103
No external refs found!