HORVU3Hr1G010240.1

Description : RAV/NGATHA-type transcription factor & AP2-RAV-type transcription factor *(EDF)

Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU3Hr1G010240.1
Cluster	HCAA Clusters: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g19260	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G082227	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G169654	No alias	related to ABI3/VP1 2	0.03	Orthogroups_2024-Update
Glyma.01G087500	No alias	AP2/B3 transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.02G099500	No alias	AP2/B3 transcription factor family protein	0.03	Orthogroups_2024-Update
HORVU3Hr1G010200.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
HORVU4Hr1G021650.14	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
PSME_00032471-RA	No alias	(at1g68840 : 300.0) Rav2 is part of a complex that has...	0.02	Orthogroups_2024-Update
PSME_00057154-RA	No alias	(at1g13260 : 282.0) Encodes an AP2/B3 domain...	0.04	Orthogroups_2024-Update
Potri.010G129200	No alias	AP2/B3 transcription factor family protein	0.03	Orthogroups_2024-Update
Seita.5G096900.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Seita.6G064600.1	No alias	RAV/NGATHA-type transcription factor	0.05	Orthogroups_2024-Update
Solyc04g007000	No alias	AP2/B3 transcription factor family protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen04g002090	No alias	B3 DNA binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	56	103
IPR003340	B3_DNA-bd	169	264

External Links

No external refs found!

HORVU3Hr1G010240.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation