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Description : 16S-rRNA maturation factor *(RAP)
Gene families : OG_42_0003823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003823_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU3Hr1G015690.1 | |
| Cluster | HCAA Clusters: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g45410 | No alias | RAP | 0.03 | Orthogroups_2024-Update | |
| Seita.5G064200.1 | No alias | 16S-rRNA maturation factor *(RAP) | 0.05 | Orthogroups_2024-Update | |
| Sobic.003G030900.1 | No alias | 16S-rRNA maturation factor *(RAP) | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015689 | molybdate ion transport | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| BP | GO:0016485 | protein processing | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| BP | GO:0051604 | protein maturation | IEP | Predicted GO |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013584 | RAP | 621 | 677 |
| No external refs found! |