1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU3Hr1G038610.1

HORVU3Hr1G038610.1


Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex


Gene families : OG_42_0002113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G038610.1
Cluster HCAA Clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Seita.5G044900.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 Orthogroups_2024-Update
Seita.9G407400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 Orthogroups_2024-Update
Sobic.003G128400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 83 264
No external refs found!