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  5. At3g05890

At3g05890


Description : RCI2B [Source:UniProtKB/TrEMBL;Acc:A0A178VG66]


Gene families : OG_42_0000502 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g05890
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi1g47270 No alias Low temperature and salt responsive protein family 0.04 Orthogroups_2024-Update
Brara.A02236.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01437.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00531.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.02G205102 No alias Low temperature and salt responsive protein family 0.03 Orthogroups_2024-Update
HORVU1Hr1G017700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G113020.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g44180 No alias OsRCI2-10 - Hydrophobic protein LTI6A, expressed 0.03 Orthogroups_2024-Update
Potri.005G002100 No alias Low temperature and salt responsive protein family 0.03 Orthogroups_2024-Update
Solyc01g102290 No alias protein RARE-COLD-INDUCIBLE 2B-like 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000612 PMP3 6 52
No external refs found!