HORVU3Hr1G062590.1

Description : component *(eL43) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU3Hr1G062590.1
Cluster	HCAA Clusters: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g17040	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Bradi2g46580	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Brara.I04155.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Cre06.g257150	No alias	Zinc-binding ribosomal protein family protein	0.04	Orthogroups_2024-Update
GRMZM2G088880	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.07G118600	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.11G039200	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.17G149600	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G081910.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
LOC_Os05g48320	No alias	60S ribosomal protein L37a, putative, expressed	0.03	Orthogroups_2024-Update
MA_158457g0010	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.03	Orthogroups_2024-Update
MA_4732g0010	No alias	(q5qm99\|rl37a_orysa : 129.0) 60S ribosomal protein L37a...	0.04	Orthogroups_2024-Update
Mp5g09590.1	No alias	component RPL37a of LSU proteome component	0.03	Orthogroups_2024-Update
PSME_00003753-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.05	Orthogroups_2024-Update
PSME_00039252-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.06	Orthogroups_2024-Update
PSME_00044091-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.05	Orthogroups_2024-Update
Potri.001G149300	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Pp1s200_49V6	No alias	60s ribosomal protein l37a	0.08	Orthogroups_2024-Update
Pp1s2_289V6	No alias	60s ribosomal protein l37a	0.07	Orthogroups_2024-Update
Pp1s39_288V6	No alias	60s ribosomal protein l37a	0.07	Orthogroups_2024-Update
Pp1s76_74V6	No alias	60s ribosomal protein l37a	0.07	Orthogroups_2024-Update
Sobic.004G045400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.006G047400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.009G227400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Solyc08g007140	No alias	60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI)	0.07	Orthogroups_2024-Update
Solyc08g077720	No alias	60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI)	0.05	Orthogroups_2024-Update
Sopen08g003090	No alias	Ribosomal L37ae protein family	0.07	Orthogroups_2024-Update
Sopen08g026220	No alias	Ribosomal L37ae protein family	0.06	Orthogroups_2024-Update
evm.model.tig00000718.64	No alias	(q9xhe4\|rl37a_goshi : 145.0) 60S ribosomal protein L37a...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000178	exosome (RNase complex)	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
BP	GO:0002097	tRNA wobble base modification	IEP	Predicted GO
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
CC	GO:0005787	signal peptidase complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
CC	GO:0008290	F-actin capping protein complex	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
BP	GO:0010639	negative regulation of organelle organization	IEP	Predicted GO
BP	GO:0010921	regulation of phosphatase activity	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
BP	GO:0019439	aromatic compound catabolic process	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
BP	GO:0030832	regulation of actin filament length	IEP	Predicted GO
BP	GO:0030833	regulation of actin filament polymerization	IEP	Predicted GO
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predicted GO
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Predicted GO
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	Predicted GO
BP	GO:0031333	negative regulation of protein complex assembly	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
BP	GO:0032271	regulation of protein polymerization	IEP	Predicted GO
BP	GO:0032272	negative regulation of protein polymerization	IEP	Predicted GO
BP	GO:0032535	regulation of cellular component size	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Predicted GO
BP	GO:0032970	regulation of actin filament-based process	IEP	Predicted GO
BP	GO:0033043	regulation of organelle organization	IEP	Predicted GO
CC	GO:0033588	Elongator holoenzyme complex	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predicted GO
BP	GO:0035303	regulation of dephosphorylation	IEP	Predicted GO
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predicted GO
BP	GO:0043242	negative regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043254	regulation of protein complex assembly	IEP	Predicted GO
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predicted GO
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predicted GO
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predicted GO
BP	GO:0046434	organophosphate catabolic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0046700	heterocycle catabolic process	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0051016	barbed-end actin filament capping	IEP	Predicted GO
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051336	regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predicted GO
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Predicted GO
BP	GO:0051693	actin filament capping	IEP	Predicted GO
BP	GO:0090066	regulation of anatomical structure size	IEP	Predicted GO
CC	GO:0098805	whole membrane	IEP	Predicted GO
BP	GO:0110053	regulation of actin filament organization	IEP	Predicted GO
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predicted GO
BP	GO:1901879	regulation of protein depolymerization	IEP	Predicted GO
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Predicted GO
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Predicted GO
CC	GO:1905354	exoribonuclease complex	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002674	Ribosomal_L37ae	25	109

External Links

No external refs found!

HORVU3Hr1G062590.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation